3Q98		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	MSE	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	The ygeW encoded protein from Escherichia coli is a knotted ancestral catabolic transcarbamylase., Li Y, Jin Z, Yu X, Allewell NM, Tuchman M, Shi D, Proteins. 2011 Jul;79(7):2327-34. doi: 10.1002/prot.23043. Epub 2011 May, 9. PMID:21557323

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (130 Kb) [Save to disk] Biological Unit Coordinates (3q98.pdb1.gz) 371 Kb LPC: Ligand-Protein Contacts for 3Q98 CSU: Contacts of Structural Units for 3Q98 Structure Factors (848 Kb) Retrieve 3Q98 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3Q98 from S2C, [Save to disk] Re-refined 3q98 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3Q98 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3q98] [3q98_A] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---