3QMV	Hydrolase	date	Feb 05, 2011
title	Redj-Thioesterase From The Prodiginine Biosynthetic Pathway Streptomyces Coelicolor
authors	J.R.Whicher, J.L.Smith
compound		source
Molecule: Thioesterase Chain: A, B, C, D Fragment: Unp Residues 6-261 Synonym: Redj Ec: 3.1.2.- Engineered: Yes		Organism_scientific: Streptomyces Coelicolor Organism_taxid: 1902 Gene: Sco5894, Sc3f7.14 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1 21 1	R_factor 0.201 R_Free 0.249
crystal cell	length a length b length c angle alpha angle beta angle gamma 74.813 79.399 87.438 90.00 90.12 90.00
method	X-Ray Diffraction	resolution	2.12 Å
ligand	MSE	enzyme	Hydrolase E.C.3.1.2 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	Structure and Function of RedJ, a thioesterase from the prodiginine biosynthetic pathway in Streptomyces coelicolor., Whicher JR, Florova G, Sydor PK, Singh R, Alhamadsheh M, Challis GL, Reynolds KA, Smith JL, J Biol Chem. 2011 May 3. PMID:21543318

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (178 Kb) [Save to disk] Biological Unit Coordinates (3qmv.pdb1.gz) 88 Kb Biological Unit Coordinates (3qmv.pdb2.gz) 87 Kb LPC: Ligand-Protein Contacts for 3QMV CSU: Contacts of Structural Units for 3QMV Structure Factors (2670 Kb) Retrieve 3QMV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3QMV from S2C, [Save to disk] Re-refined 3qmv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3QMV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3QMV

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3QMV, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3qmv_A] [3qmv_D] [3qmv_C] [3qmv] [3qmv_B] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3QMV

Community annotation for 3QMV at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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