3RL8	Membrane Protein Signaling Protein	date	Apr 19, 2011
title	Crystal Structure Of Hdlg1-Pdz2 Complexed With Apc
authors	Z.Zhang, H.Li, G.Wu
compound		source
Molecule: Disks Large Homolog 1 Chain: A, B, C, D, E Fragment: Unp Residues 315-410 Synonym: Synapse-Associated Protein 97, Sap-97, Sap97, Hdlg Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Dlg1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28a
Molecule: 11-Mer Peptide From Adenomatous Polyposis Coli Pr Chain: F Synonym: Apc-C11 Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Other_details: This Sequence Occurs Naturally In Humans
symmetry	Space Group: P 1 21 1	R_factor 0.204 R_Free 0.245
crystal cell	length a length b length c angle alpha angle beta angle gamma 67.806 52.502 87.426 90.00 102.42 90.00
method	X-Ray Diffraction	resolution	2.20 Å
Primary reference	Molecular basis for the recognition of adenomatous polyposis coli by the Discs Large 1 protein., Zhang Z, Li H, Chen L, Lu X, Zhang J, Xu P, Lin K, Wu G, PLoS One. 2011;6(8):e23507. Epub 2011 Aug 17. PMID:21858148

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (162 Kb) [Save to disk] Biological Unit Coordinates (3rl8.pdb1.gz) 156 Kb CSU: Contacts of Structural Units for 3RL8 Structure Factors (695 Kb) Retrieve 3RL8 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3RL8 from S2C, [Save to disk] Re-refined 3rl8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3RL8 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3RL8

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3RL8, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3rl8_E] [3rl8_D] [3rl8_C] [3rl8_A] [3rl8_F] [3rl8_B] [3rl8] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3RL8: [PDZ ] by SMART

Other resources with information on 3RL8

Community annotation for 3RL8 at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---