3S8D		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	MSE	enzyme
Gene	YP
Gene Ontology	Chain Function Process Component A, B
Primary reference	Biochemical, structural and molecular dynamics analyses of the potential virulence factor RipA from Yersinia pestis., Torres R, Swift RV, Chim N, Wheatley N, Lan B, Atwood BR, Pujol C, Sankaran B, Bliska JB, Amaro RE, Goulding CW, PLoS One. 2011;6(9):e25084. Epub 2011 Sep 26. PMID:21966419

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (141 Kb) [Save to disk] Biological Unit Coordinates (3s8d.pdb1.gz) 134 Kb LPC: Ligand-Protein Contacts for 3S8D CSU: Contacts of Structural Units for 3S8D Structure Factors (188 Kb) Retrieve 3S8D in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3S8D from S2C, [Save to disk] Re-refined 3s8d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3S8D in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3s8d] [3s8d_A] [3s8d_B] SWISS-PROT database:

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