3TX8	Crystal structure of a succinyl-diaminopimelate desuccinylase (ArgE) from Corynebacterium glutamicum ATCC 13032 at 2.97 A resolution	date
authors	JCSG, Joint.Center.for.Structural.Genomics., Brunger, A.T., Terwilliger, T.C., Read, R.J., Adams, P.D., Levitt, M., Schroder, G.F.
compound		source
symmetry		R_factor R_Free 0.2566
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.97
ligand	CL, MSE, PO4	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Application of DEN refinement and automated model building to a difficult case of molecular-replacement phasing: the structure of a putative succinyl-diaminopimelate desuccinylase from Corynebacterium glutamicum., Brunger AT, Das D, Deacon AM, Grant J, Terwilliger TC, Read RJ, Adams PD, Levitt M, Schroder GF, Acta Crystallogr D Biol Crystallogr. 2012 Apr;68(Pt 4):391-403. Epub 2012 Mar 16. PMID:22505259

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (123 Kb) [Save to disk] Biological Unit Coordinates (3tx8.pdb1.gz) 231 Kb LPC: Ligand-Protein Contacts for 3TX8 CSU: Contacts of Structural Units for 3TX8 Structure Factors (2923 Kb) Retrieve 3TX8 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3TX8 from S2C, [Save to disk] Re-refined 3tx8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3TX8 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3TX8

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3TX8, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3tx8_A] [3tx8] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3TX8

Community annotation for 3TX8 at PDBWiki (http://pdbwiki.org)

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