3U7V Hydrolase date Oct 14, 2011
title The Structure Of A Putative Beta-Galactosidase From Caulobac Crescentus Cb15.
authors M.E.Cuff, C.Tesar, S.Clancy, A.Joachimiak, Midwest Center For St Genomics (Mcsg)
compound source
Molecule: Beta-Galactosidase
Chain: A
Ec: 3.2.1.23
Engineered: Yes
Organism_scientific: Caulobacter Crescentus
Organism_taxid: 565050
Strain: Na1000
Gene: Ccna_00830, Laca
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3) Magic
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg7
symmetry Space Group: I 4
R_factor 0.184 R_Free 0.215
crystal
cell
length a length b length c angle alpha angle beta angle gamma
148.306 148.306 53.792 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand ACY, MSE enzyme Hydrolase E.C.3.2.1.23 BRENDA
Gene CCNA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (175 Kb) [Save to disk]
  • Biological Unit Coordinates (3u7v.pdb1.gz) 669 Kb
  • LPC: Ligand-Protein Contacts for 3U7V
  • CSU: Contacts of Structural Units for 3U7V
  • Structure Factors (3182 Kb)
  • Retrieve 3U7V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3U7V from S2C, [Save to disk]
  • Re-refined 3u7v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3U7V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3U7V
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3U7V, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3u7v_A] [3u7v]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3U7V
  • Community annotation for 3U7V at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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