3UBT date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 2PE, ATP, CL enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, Y, A
  • DNA (cytosine-5-)-methyltran...


    • Primary referenceStructural origins of DNA target selection and nucleobase extrusion by a DNA Cytosine methyltransferase., Didovyk A, Verdine GL, J Biol Chem. 2012 Nov 23;287(48):40099-105. doi: 10.1074/jbc.M112.413054. Epub, 2012 Sep 25. PMID:23012373
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (190 Kb) [Save to disk]
  • Biological Unit Coordinates (3ubt.pdb1.gz) 65 Kb
  • Biological Unit Coordinates (3ubt.pdb2.gz) 65 Kb
  • Biological Unit Coordinates (3ubt.pdb3.gz) 65 Kb
  • LPC: Ligand-Protein Contacts for 3UBT
  • CSU: Contacts of Structural Units for 3UBT
  • Structure Factors (282 Kb)
  • Retrieve 3UBT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UBT from S2C, [Save to disk]
  • Re-refined 3ubt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3UBT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ubt] [3ubt_A] [3ubt_B] [3ubt_C] [3ubt_D] [3ubt_E] [3ubt_F] [3ubt_G] [3ubt_H] [3ubt_Y]
  • SWISS-PROT database:

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