3UJO Sugar Binding Protein date Nov 08, 2011
title Galactose-Specific Seed Lectin From Dolichos Lablab In Compl Adenine And Galactose
authors K.N.Shetty, V.L.Latha, R.N.Rao, S.K.Nadimpalli, K.Suguna
compound source
Molecule: Legume Lectin
Chain: A, B, C, D
 Organism_scientific: Dolichos Lablab
Organism_taxid: 35936
Tissue: Seed
symmetry Space Group: P 32
R_factor 0.208 R_Free 0.250
crystal
cell
length a length b length c angle alpha angle beta angle gamma
89.780 89.780 123.890 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.00 Å
ligand ADE, CA, EDO, GAL, MN, PEG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceAffinity of a galactose-specific legume lectin from Dolichos lablab to adenine revealed by X-ray cystallography., Shetty KN, Latha VL, Rao RN, Nadimpalli SK, Suguna K, IUBMB Life. 2013 Jul;65(7):633-44. doi: 10.1002/iub.1177. PMID:23794513
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (162 Kb) [Save to disk]
  • Biological Unit Coordinates (3ujo.pdb1.gz) 154 Kb
  • LPC: Ligand-Protein Contacts for 3UJO
  • CSU: Contacts of Structural Units for 3UJO
  • Structure Factors (4131 Kb)
  • Retrieve 3UJO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UJO from S2C, [Save to disk]
  • Re-refined 3ujo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3UJO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3UJO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3UJO, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ujo_D] [3ujo] [3ujo_B] [3ujo_A] [3ujo_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3UJO
  • Community annotation for 3UJO at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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