3UT5	Structural Protein Inhibitor	date	Nov 25, 2011
title	Tubulin-Colchicine-Ustiloxin: Stathmin-Like Domain Complex
authors	F.M.Ranaivoson, B.Gigant, M.Knossow
compound		source
Molecule: Tubulin Alpha Chain Chain: A, C		Organism_scientific: Ovis Aries Organism_common: Domestic Sheep,Lambs,Wild Sheep Organism_taxid: 9940
Molecule: Tubulin Beta Chain Chain: B, D		Organism_scientific: Ovis Aries Organism_common: Domestic Sheep,Lambs,Wild Sheep Organism_taxid: 9940
Molecule: Stathmin-4 Chain: E Synonym: Stathmin-Like Protein B3, Rb3 Engineered: Yes Mutation: Yes		Organism_scientific: Rattus Norvegicus Organism_common: Rat Organism_taxid: 10116 Gene: Stmn4 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet-8c
Molecule: Vinca Tetrapeptide Chain: F Engineered: Yes		Synthetic: Yes
symmetry	Space Group: P 21 21 21	R_factor 0.184 R_Free 0.222
crystal cell	length a length b length c angle alpha angle beta angle gamma 64.810 128.870 254.840 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.73 Å
ligand	0E5, 0EA, GDP, GTP, LOC, MG, SO4 BindingDB	enzyme
Gene Ontology	Chain Function Process Component A, C structural constituent of cy... D, B structural constituent of cy... E
Primary reference	Structural plasticity of tubulin assembly probed by vinca-domain ligands., Ranaivoson FM, Gigant B, Berritt S, Joullie M, Knossow M, Acta Crystallogr D Biol Crystallogr. 2012 Aug;68(Pt 8):927-34. Epub 2012 Jul 7. PMID:22868758

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (649 Kb) [Save to disk] Biological Unit Coordinates (3ut5.pdb1.gz) 640 Kb LPC: Ligand-Protein Contacts for 3UT5 CSU: Contacts of Structural Units for 3UT5 Structure Factors (1190 Kb) Retrieve 3UT5 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3UT5 from S2C, [Save to disk] Re-refined 3ut5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3UT5 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3UT5

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3UT5, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ut5_D] [3ut5_F] [3ut5_B] [3ut5_A] [3ut5] [3ut5_C] [3ut5_E] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3UT5: [Tubulin] [Tubulin_C ] by SMART

Other resources with information on 3UT5

Community annotation for 3UT5 at PDBWiki (http://pdbwiki.org)

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