3V9P date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ACT, GOL, MRD, PEG enzyme
Gene BTH ; YP
Gene
Ontology
ChainFunctionProcessComponent
B, A
  • thymidylate kinase activity


    • Primary referenceCombining functional and structural genomics to sample the essential Burkholderia structome., Baugh L, Gallagher LA, Patrapuvich R, Clifton MC, Gardberg AS, Edwards TE, Armour B, Begley DW, Dieterich SH, Dranow DM, Abendroth J, Fairman JW, Fox D 3rd, Staker BL, Phan I, Gillespie A, Choi R, Nakazawa-Hewitt S, Nguyen MT, Napuli A, Barrett L, Buchko GW, Stacy R, Myler PJ, Stewart LJ, Manoil C, Van Voorhis WC, PLoS One. 2013;8(1):e53851. doi: 10.1371/journal.pone.0053851. Epub 2013 Jan 31. PMID:23382856
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (137 Kb) [Save to disk]
  • Biological Unit Coordinates (3v9p.pdb1.gz) 66 Kb
  • Biological Unit Coordinates (3v9p.pdb2.gz) 68 Kb
  • Biological Unit Coordinates (3v9p.pdb3.gz) 131 Kb
  • LPC: Ligand-Protein Contacts for 3V9P
  • CSU: Contacts of Structural Units for 3V9P
  • Structure Factors (529 Kb)
  • Retrieve 3V9P in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3V9P from S2C, [Save to disk]
  • Re-refined 3v9p structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3V9P in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3v9p] [3v9p_A] [3v9p_B]
  • SWISS-PROT database:

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