3VAX date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand PLP enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceCrystal structure of the cysteine desulfurase DndA from Streptomyces lividans which is involved in DNA phosphorothioation., Chen F, Zhang Z, Lin K, Qian T, Zhang Y, You D, He X, Wang Z, Liang J, Deng Z, Wu G, PLoS One. 2012;7(5):e36635. doi: 10.1371/journal.pone.0036635. Epub 2012 May 3. PMID:22570733
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (236 Kb) [Save to disk]
  • Biological Unit Coordinates (3vax.pdb1.gz) 117 Kb
  • Biological Unit Coordinates (3vax.pdb2.gz) 116 Kb
  • Biological Unit Coordinates (3vax.pdb3.gz) 230 Kb
  • LPC: Ligand-Protein Contacts for 3VAX
  • CSU: Contacts of Structural Units for 3VAX
  • Structure Factors (516 Kb)
  • Retrieve 3VAX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3VAX from S2C, [Save to disk]
  • Re-refined 3vax structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3VAX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3vax] [3vax_A] [3vax_B]
  • SWISS-PROT database:

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