3VDC		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	DMS, IPT, MG, NA	enzyme
Gene Ontology	Chain Function Process Component B, C, A, D
Primary reference	Substitution for Asn460 Cripples beta-galactosidase (Escherichia coli) by increasing substrate affinity and decreasing transition state stability., Wheatley RW, Kappelhoff JC, Hahn JN, Dugdale ML, Dutkoski MJ, Tamman SD, Fraser ME, Huber RE, Arch Biochem Biophys. 2012 Mar 22;521(1-2):51-61. PMID:22446164

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (691 Kb) [Save to disk] Biological Unit Coordinates (3vdc.pdb1.gz) 681 Kb LPC: Ligand-Protein Contacts for 3VDC CSU: Contacts of Structural Units for 3VDC Structure Factors (2362 Kb) Retrieve 3VDC in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3VDC from S2C, [Save to disk] Re-refined 3vdc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3VDC in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3vdc] [3vdc_A] [3vdc_B] [3vdc_C] [3vdc_D] SWISS-PROT database: Domain found in 3VDC: [Bgal_small_N ] by SMART

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