3VDX		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
note	3VDX (Molecule of the Month:pdb165)
Gene Ontology	Chain Function Process Component C, B, A peroxidase activity
Primary reference	Structure of a 16-nm cage designed by using protein oligomers., Lai YT, Cascio D, Yeates TO, Science. 2012 Jun 1;336(6085):1129. PMID:22654051

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (205 Kb) [Save to disk] Biological Unit Coordinates (3vdx.pdb1.gz) 792 Kb CSU: Contacts of Structural Units for 3VDX Structure Factors (206 Kb) Retrieve 3VDX in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3VDX from S2C, [Save to disk] Re-refined 3vdx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3VDX in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3vdx] [3vdx_A] [3vdx_B] [3vdx_C] SWISS-PROT database:

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