3VM5		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CA, CL	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Structural and functional characterization of recombinant medaka fish alpha-amylase expressed in yeast Pichia pastoris., Mizutani K, Toyoda M, Otake Y, Yoshioka S, Takahashi N, Mikami B, Biochim Biophys Acta. 2012 May 18. PMID:22613096

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk] Biological Unit Coordinates (3vm5.pdb1.gz) 79 Kb LPC: Ligand-Protein Contacts for 3VM5 CSU: Contacts of Structural Units for 3VM5 Structure Factors (124 Kb) Retrieve 3VM5 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3VM5 from S2C, [Save to disk] Re-refined 3vm5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3VM5 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3vm5] [3vm5_A] SWISS-PROT database: Domains found in 3VM5: [Aamy] [Aamy_C ] by SMART

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