3VYI date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceGating of the designed trimeric/tetrameric voltage-gated H+ channel., Fujiwara Y, Kurokawa T, Takeshita K, Nakagawa A, Larsson HP, Okamura Y, J Physiol. 2013 Feb 1;591(Pt 3):627-40. doi: 10.1113/jphysiol.2012.243006. Epub, 2012 Nov 19. PMID:23165764
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (95 Kb) [Save to disk]
  • Biological Unit Coordinates (3vyi.pdb1.gz) 25 Kb
  • Biological Unit Coordinates (3vyi.pdb2.gz) 25 Kb
  • Biological Unit Coordinates (3vyi.pdb3.gz) 22 Kb
  • Biological Unit Coordinates (3vyi.pdb4.gz) 21 Kb
  • CSU: Contacts of Structural Units for 3VYI
  • Structure Factors (365 Kb)
  • Retrieve 3VYI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3VYI from S2C, [Save to disk]
  • Re-refined 3vyi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3VYI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3vyi] [3vyi_A] [3vyi_B] [3vyi_C] [3vyi_D] [3vyi_E] [3vyi_F] [3vyi_G] [3vyi_H] [3vyi_I] [3vyi_J] [3vyi_K] [3vyi_L]
  • SWISS-PROT database:

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science