3WC1	Transferase Rna	date	May 24, 2013
title	Crystal Structure Of C. Albicans Trna(His) Guanylyltransfera With A G-1 Deleted Trna(His)
authors	A.Nakamura, T.Nemoto, T.Sonoda, K.Yamashita, I.Tanaka, M.Yao
compound		source
Molecule: Likely Histidyl Trna-Specific Guanylyltransferase Chain: A, B, C, D Fragment: Unp Residues 1-262 Engineered: Yes		Organism_scientific: Candida Albicans Organism_common: Yeast Organism_taxid: 237561 Strain: Sc5314 Atcc Mya-2876 Gene: Cao19.7063, Cawg_05412, Orf19.7063, Thg1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: B834(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet26b
Molecule: 75-Mer Trna Chain: P, Q Engineered: Yes		Synthetic: Yes Other_details: In Vitro Transcription
symmetry	Space Group: P 31 2 1	R_factor 0.292 R_Free 0.335
crystal cell	length a length b length c angle alpha angle beta angle gamma 96.530 96.530 300.390 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	4.18 Å
Gene	CAWG
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	Structural basis of reverse nucleotide polymerization., Nakamura A, Nemoto T, Heinemann IU, Yamashita K, Sonoda T, Komoda K, Tanaka I, Soll D, Yao M, Proc Natl Acad Sci U S A. 2013 Dec 24;110(52):20970-5. doi:, 10.1073/pnas.1321312111. Epub 2013 Dec 9. PMID:24324136

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (474 Kb) [Save to disk] Biological Unit Coordinates (3wc1.pdb1.gz) 468 Kb CSU: Contacts of Structural Units for 3WC1 Structure Factors (113 Kb) Retrieve 3WC1 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3WC1 from S2C, [Save to disk] Re-refined 3wc1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3WC1 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3WC1

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3WC1, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1f3wc1, region C:116-217 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3wc1_P] [3wc1_Q] [3wc1_B] [3wc1_A] [3wc1_D] [3wc1] [3wc1_C] SWISS-PROT database: Domain organization of by SWISSPFAM

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