3WOD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ZN	enzyme
Gene Ontology	Chain Function Process Component A, B C D E F bacterial sigma factor activ...
Primary reference	Structural basis for promoter specificity switching of RNA polymerase by a phage factor., Tagami S, Sekine S, Minakhin L, Esyunina D, Akasaka R, Shirouzu M, Kulbachinskiy A, Severinov K, Yokoyama S, Genes Dev. 2014 Mar 1;28(5):521-31. doi: 10.1101/gad.233916.113. PMID:24589779

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (592 Kb) [Save to disk] Biological Unit Coordinates (3wod.pdb1.gz) 584 Kb LPC: Ligand-Protein Contacts for 3WOD CSU: Contacts of Structural Units for 3WOD Structure Factors (2204 Kb) Retrieve 3WOD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3WOD from S2C, [Save to disk] Re-refined 3wod structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3WOD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3wod] [3wod_A] [3wod_B] [3wod_C] [3wod_D] [3wod_E] [3wod_F] [3wod_G] [3wod_H] SWISS-PROT database: Domains found in 3WOD: [HhH1] [RNA_pol_Rpb6] [RPOLA_N] [RPOLD ] by SMART

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