4AD3	Hydrolase	date	Dec 21, 2011
title	Structure Of The Gh99 Endo-Alpha-Mannosidase From Bacteroide Xylanisolvens In Complex With Glucose-1,3-Deoxymannojirimyc
authors	A.J.Thompson, R.J.Williams, Z.Hakki, D.S.Alonzi, T.Wennekes, T.M. K.Songsrirote, J.E.Thomas-Oates, T.M.Wrodnigg, J.Spreitz, A.E.S T.D.Butters, S.J.Williams, G.J.Davies
compound		source
Molecule: Glycosyl Hydrolase Family 71 Chain: A, B, C, D Synonym: Endo-Alpha-Mannosidase Ec: 3.2.1.130 Engineered: Yes		Organism_scientific: Bacteroides Xylanisolvens Organism_taxid: 657309 Strain: Xb1a Expression_system: Escherichia Coli Expression_system_taxid: 511693 Expression_system_strain: Bl21
symmetry	Space Group: P 31 2 1	R_factor 0.175 R_Free 0.202
crystal cell	length a length b length c angle alpha angle beta angle gamma 222.478 222.478 84.715 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	DMJ, GLC	enzyme	Hydrolase E.C.3.2.1.130 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	Structural and mechanistic insight into N-glycan processing by endo-alpha-mannosidase., Thompson AJ, Williams RJ, Hakki Z, Alonzi DS, Wennekes T, Gloster TM, Songsrirote K, Thomas-Oates JE, Wrodnigg TM, Spreitz J, Stutz AE, Butters TD, Williams SJ, Davies GJ, Proc Natl Acad Sci U S A. 2012 Jan 4. PMID:22219371

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (252 Kb) [Save to disk] Biological Unit Coordinates (4ad3.pdb1.gz) 66 Kb Biological Unit Coordinates (4ad3.pdb2.gz) 68 Kb Biological Unit Coordinates (4ad3.pdb3.gz) 65 Kb Biological Unit Coordinates (4ad3.pdb4.gz) 56 Kb LPC: Ligand-Protein Contacts for 4AD3 CSU: Contacts of Structural Units for 4AD3 Structure Factors (2148 Kb) Retrieve 4AD3 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4AD3 from S2C, [Save to disk] Re-refined 4ad3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Visual 3D analysis of 4AD3

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4AD3, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1f4ad3, region D:3-219 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4ad3_A] [4ad3_D] [4ad3_B] [4ad3] [4ad3_C] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4AD3

Community annotation for 4AD3 at PDBWiki (http://pdbwiki.org)

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