OCA Atlas for 4ADQ

4ADQ

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

BMA, MAN, NAG

enzyme

Gene
Ontology

Chain	Function	Process	Component
C, D, A, B
H, F, G, E

Primary reference

Allosteric competitive inactivation of hematopoietic CSF-1 signaling by the viral decoy receptor BARF1., Elegheert J, Bracke N, Pouliot P, Gutsche I, Shkumatov AV, Tarbouriech N, Verstraete K, Bekaert A, Burmeister WP, Svergun DI, Lambrecht BN, Vergauwen B, Savvides SN, Nat Struct Mol Biol. 2012 Sep;19(9):938-47. doi: 10.1038/nsmb.2367. Epub 2012 Aug, 19. PMID:22902366

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (224 Kb) [Save to disk]

Biological Unit Coordinates (4adq.pdb1.gz) 324 Kb

Biological Unit Coordinates (4adq.pdb2.gz) 324 Kb

LPC: Ligand-Protein Contacts for 4ADQ

CSU: Contacts of Structural Units for 4ADQ

Structure Factors (222 Kb)

Retrieve 4ADQ in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4ADQ from S2C, [Save to disk]

Re-refined 4adq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4ADQ in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4adq] [4adq_A] [4adq_B] [4adq_C] [4adq_D] [4adq_E] [4adq_F] [4adq_G] [4adq_H]

SWISS-PROT database:

Domain found in 4ADQ: [IG_like ] by SMART

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