4C0Z The N-terminal domain of the Streptococcus pyogenes pilus tip adhesin Cpa date
authors Linke-Winnebeck, C., Paterson, N., Baker, E.N.
compound source
symmetry
R_factor
R_Free 0.2320
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.00
ligand CL, GOL, PO4, SPD enzyme
Primary referenceStructural model for the covalent adhesion of the Streptococcus pyogenes pilus through a thioester bond., Linke-Winnebeck C, Paterson NG, Young PG, Middleditch MJ, Greenwood DR, Witte G, Baker EN, J Biol Chem. 2013 Nov 12. PMID:24220033
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (891 Kb) [Save to disk]
  • Biological Unit Coordinates (4c0z.pdb1.gz) 152 Kb
  • Biological Unit Coordinates (4c0z.pdb2.gz) 152 Kb
  • Biological Unit Coordinates (4c0z.pdb3.gz) 153 Kb
  • Biological Unit Coordinates (4c0z.pdb4.gz) 152 Kb
  • Biological Unit Coordinates (4c0z.pdb5.gz) 152 Kb
  • Biological Unit Coordinates (4c0z.pdb6.gz) 151 Kb
  • LPC: Ligand-Protein Contacts for 4C0Z
  • CSU: Contacts of Structural Units for 4C0Z
  • Structure Factors (10080 Kb)
  • Retrieve 4C0Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4C0Z from S2C, [Save to disk]
  • Re-refined 4c0z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4C0Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4C0Z
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4C0Z, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4c0z_H] [4c0z_K] [4c0z_I] [4c0z_G] [4c0z_J] [4c0z_C] [4c0z_A] [4c0z_B] [4c0z] [4c0z_F] [4c0z_D] [4c0z_L] [4c0z_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4C0Z
  • Community annotation for 4C0Z at PDBWiki (http://pdbwiki.org)

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