4DJ4 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BMA, CL, MAN, NA, NAG, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A
  • nuclease activity
  • endonuclease activity


    • Primary referencePlant multifunctional nuclease TBN1 with unexpected phospholipase activity: structural study and reaction-mechanism analysis., Koval' T, Lipovova P, Podzimek T, Matousek J, Duskova J, Skalova T, Stepankova A, Hasek J, Dohnalek J, Acta Crystallogr D Biol Crystallogr. 2013 Feb;69(Pt 2):213-26. doi:, 10.1107/S0907444912043697. Epub 2013 Jan 16. PMID:23385457
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (101 Kb) [Save to disk]
  • Biological Unit Coordinates (4dj4.pdb1.gz) 93 Kb
  • LPC: Ligand-Protein Contacts for 4DJ4
  • CSU: Contacts of Structural Units for 4DJ4
  • Structure Factors (567 Kb)
  • Retrieve 4DJ4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4DJ4 from S2C, [Save to disk]
  • Re-refined 4dj4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4DJ4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4dj4] [4dj4_A] [4dj4_B]
  • SWISS-PROT database:

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