4DJA date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand DLZ, FAD, GOL, NA, SF4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of a prokaryotic (6-4) photolyase with an Fe-S cluster and a 6,7-dimethyl-8-ribityllumazine antenna chromophore., Zhang F, Scheerer P, Oberpichler I, Lamparter T, Krauss N, Proc Natl Acad Sci U S A. 2013 Apr 30;110(18):7217-22. doi:, 10.1073/pnas.1302377110. Epub 2013 Apr 15. PMID:23589886
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (212 Kb) [Save to disk]
  • Biological Unit Coordinates (4dja.pdb1.gz) 206 Kb
  • LPC: Ligand-Protein Contacts for 4DJA
  • CSU: Contacts of Structural Units for 4DJA
  • Structure Factors (1413 Kb)
  • Retrieve 4DJA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4DJA from S2C, [Save to disk]
  • Re-refined 4dja structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4DJA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4dja] [4dja_A]
  • SWISS-PROT database:

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