4F2N Crystal structure of iron superoxide dismutase from Leishmania major date
authors SSGCID, Seattle.Structural.Genomics.Center.for.Infectious.Disease.
compound source
symmetry
R_factor
R_Free 0.203
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.85
ligand FE2 enzyme
Gene LMJF
Gene
Ontology
ChainFunctionProcessComponent
F, A, J, K, E, B, H, C, D, I, G, L
  • superoxide dismutase activit...


  • Primary referenceIron superoxide dismutases in eukaryotic pathogens: new insights from Apicomplexa and Trypanosoma structures., Phan IQ, Davies DR, Moretti NS, Shanmugam D, Cestari I, Anupama A, Fairman JW, Edwards TE, Stuart K, Schenkman S, Myler PJ, Acta Crystallogr F Struct Biol Commun. 2015 May;71(Pt 5):615-21. doi:, 10.1107/S2053230X15004185. Epub 2015 May 7. PMID:25961325
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (843 Kb) [Save to disk]
  • Biological Unit Coordinates (4f2n.pdb1.gz) 144 Kb
  • Biological Unit Coordinates (4f2n.pdb2.gz) 143 Kb
  • Biological Unit Coordinates (4f2n.pdb3.gz) 144 Kb
  • Biological Unit Coordinates (4f2n.pdb4.gz) 143 Kb
  • Biological Unit Coordinates (4f2n.pdb5.gz) 141 Kb
  • Biological Unit Coordinates (4f2n.pdb6.gz) 142 Kb
  • LPC: Ligand-Protein Contacts for 4F2N
  • CSU: Contacts of Structural Units for 4F2N
  • Structure Factors (3702 Kb)
  • Retrieve 4F2N in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4F2N from S2C, [Save to disk]
  • Re-refined 4f2n structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4F2N in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4F2N
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4F2N, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4f2n_K] [4f2n_D] [4f2n_L] [4f2n_J] [4f2n_I] [4f2n] [4f2n_B] [4f2n_E] [4f2n_C] [4f2n_H] [4f2n_A] [4f2n_F] [4f2n_G]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4F2N
  • Community annotation for 4F2N at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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