OCA Atlas for 4G80

4G80

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
J, S, I, T

Primary reference

Structural mechanism of voltage-dependent gating in an isolated voltage-sensing domain., Li Q, Wanderling S, Paduch M, Medovoy D, Singharoy A, McGreevy R, Villalba-Galea CA, Hulse RE, Roux B, Schulten K, Kossiakoff A, Perozo E, Nat Struct Mol Biol. 2014 Mar;21(3):244-52. doi: 10.1038/nsmb.2768. Epub 2014 Feb, 2. PMID:24487958

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (359 Kb) [Save to disk]

Biological Unit Coordinates (4g80.pdb1.gz) 91 Kb

Biological Unit Coordinates (4g80.pdb2.gz) 93 Kb

Biological Unit Coordinates (4g80.pdb3.gz) 93 Kb

Biological Unit Coordinates (4g80.pdb4.gz) 94 Kb

CSU: Contacts of Structural Units for 4G80

Structure Factors (1118 Kb)

Retrieve 4G80 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4G80 from S2C, [Save to disk]

Re-refined 4g80 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4G80 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4g80] [4g80_A] [4g80_B] [4g80_C] [4g80_D] [4g80_E] [4g80_F] [4g80_G] [4g80_H] [4g80_I] [4g80_J] [4g80_S] [4g80_T]

SWISS-PROT database:

Domains found in 4G80: [IG_like] [IGv ] by SMART

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