4GCY Structure of Mycobacterium tuberculosis dUTPase H21W mutant date 2012-07-31
authors Toth, J., Vertessy, B.G., Leveles, I., Bendes, A.
compound source
symmetry
R_factor
R_Free 0.15830
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.50
ligand DUP, GOL, MG, TRS enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk]
  • Biological Unit Coordinates (4gcy.pdb1.gz) 171 Kb
  • LPC: Ligand-Protein Contacts for 4GCY
  • CSU: Contacts of Structural Units for 4GCY
  • Structure Factors (302 Kb)
  • Retrieve 4GCY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4GCY from S2C, [Save to disk]
  • Re-refined 4gcy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4GCY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4GCY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4GCY, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4gcy] [4gcy_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4GCY
  • Community annotation for 4GCY at PDBWiki (http://pdbwiki.org)

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