4GDN date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand PE4 enzyme
Primary referenceAnalysis of Structure-Function Relationships in the Colibactin-Maturating Enzyme ClbP., Cougnoux A, Gibold L, Robin F, Dubois D, Pradel N, Darfeuille-Michaud A, Dalmasso G, Delmas J, Bonnet R, J Mol Biol. 2012 Oct 2. pii: S0022-2836(12)00782-6. doi:, 10.1016/j.jmb.2012.09.017. PMID:23041299
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (215 Kb) [Save to disk]
  • Biological Unit Coordinates (4gdn.pdb1.gz) 55 Kb
  • Biological Unit Coordinates (4gdn.pdb2.gz) 55 Kb
  • Biological Unit Coordinates (4gdn.pdb3.gz) 54 Kb
  • Biological Unit Coordinates (4gdn.pdb4.gz) 55 Kb
  • LPC: Ligand-Protein Contacts for 4GDN
  • CSU: Contacts of Structural Units for 4GDN
  • Structure Factors (693 Kb)
  • Retrieve 4GDN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4GDN from S2C, [Save to disk]
  • Re-refined 4gdn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4GDN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4gdn] [4gdn_A] [4gdn_B] [4gdn_C] [4gdn_D]
  • SWISS-PROT database:

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