4GKL date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceStructure of a novel alpha-amylase AmyB from Thermotoga neapolitana that produces maltose from the nonreducing end of polysaccharides., Jun SY, Kim JS, Choi KH, Cha J, Ha NC, Acta Crystallogr D Biol Crystallogr. 2013 Mar;69(Pt 3):442-50. doi:, 10.1107/S0907444912049219. Epub 2013 Feb 16. PMID:23519419
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (148 Kb) [Save to disk]
  • Biological Unit Coordinates (4gkl.pdb1.gz) 73 Kb
  • Biological Unit Coordinates (4gkl.pdb2.gz) 73 Kb
  • CSU: Contacts of Structural Units for 4GKL
  • Structure Factors (651 Kb)
  • Retrieve 4GKL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4GKL from S2C, [Save to disk]
  • Re-refined 4gkl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4GKL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4gkl] [4gkl_A] [4gkl_B]
  • SWISS-PROT database:
  • Domain found in 4GKL: [Aamy ] by SMART

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science