4GLS date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand DAL, DAR, DAS, DCY, DGL, DGN, DHI, DIL, DLE, DLY, DPN, DPR, DSG, DSN, DTH, DTR, DTY, DVA, GOL, MED, PEG enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, E


Primary referenceChemical synthesis and X-ray structure of a heterochiral {D-protein antagonist plus vascular endothelial growth factor} protein complex by racemic crystallography., Mandal K, Uppalapati M, Ault-Riche D, Kenney J, Lowitz J, Sidhu SS, Kent SB, Proc Natl Acad Sci U S A. 2012 Sep 11;109(37):14779-84. doi:, 10.1073/pnas.1210483109. Epub 2012 Aug 27. PMID:22927390
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (248 Kb) [Save to disk]
  • Biological Unit Coordinates (4gls.pdb1.gz) 227 Kb
  • LPC: Ligand-Protein Contacts for 4GLS
  • CSU: Contacts of Structural Units for 4GLS
  • Structure Factors (1167 Kb)
  • Retrieve 4GLS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4GLS from S2C, [Save to disk]
  • Re-refined 4gls structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4GLS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4gls] [4gls_A] [4gls_B] [4gls_C] [4gls_D] [4gls_E] [4gls_F] [4gls_G] [4gls_H]
  • SWISS-PROT database:
  • Domain found in 4GLS: [PDGF ] by SMART

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