4J4W Crystal structure of BueVN date 2013-02-07
authors Jiao, L., Ouyang, S., Liang, M., Niu, F., Shaw, N., Wu, W., Ding, W., Jin, C., Zhu, Y., Zhang, F., Wang, T., Li, C., Zuo, X., Luan, C.H., Li, D., Liu, Z.J.
compound source
symmetry
R_factor
R_Free 0.2540
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.66
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of severe Fever with thrombocytopenia syndrome virus nucleocapsid protein in complex with suramin reveals therapeutic potential., Jiao L, Ouyang S, Liang M, Niu F, Shaw N, Wu W, Ding W, Jin C, Peng Y, Zhu Y, Zhang F, Wang T, Li C, Zuo X, Luan CH, Li D, Liu ZJ, J Virol. 2013 Jun;87(12):6829-39. doi: 10.1128/JVI.00672-13. Epub 2013 Apr 10. PMID:23576501
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk]
  • Biological Unit Coordinates (4j4w.pdb1.gz) 152 Kb
  • CSU: Contacts of Structural Units for 4J4W
  • Structure Factors (199 Kb)
  • Retrieve 4J4W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4J4W from S2C, [Save to disk]
  • Re-refined 4j4w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4J4W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4J4W
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4J4W, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4j4w] [4j4w_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4J4W
  • Community annotation for 4J4W at PDBWiki (http://pdbwiki.org)

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