4J56 Structure of Plasmodium falciparum thioredoxin reductase-thioredoxin complex date 2013-02-08
authors Fritz-Wolf, K., Jortzik, E., Stumpf, M., Preuss, J., Iozef, R., Rahlfs, S., Becker, K.
compound source
symmetry
R_factor
R_Free 0.2592
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.37
ligand FAD enzyme
Gene PF14
Gene
Ontology
ChainFunctionProcessComponent
A, B, C, D


F, E, H, G


Primary referenceCrystal Structure of the Plasmodium falciparum Thioredoxin Reductase-Thioredoxin Complex., Fritz-Wolf K, Jortzik E, Stumpf M, Preuss J, Iozef R, Rahlfs S, Becker K, J Mol Biol. 2013 Jul 9. pii: S0022-2836(13)00432-4. doi:, 10.1016/j.jmb.2013.06.037. PMID:23845423
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (391 Kb) [Save to disk]
  • Biological Unit Coordinates (4j56.pdb1.gz) 194 Kb
  • Biological Unit Coordinates (4j56.pdb2.gz) 195 Kb
  • LPC: Ligand-Protein Contacts for 4J56
  • CSU: Contacts of Structural Units for 4J56
  • Structure Factors (842 Kb)
  • Retrieve 4J56 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4J56 from S2C, [Save to disk]
  • Re-refined 4j56 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4J56 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4J56
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4J56, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4j56_F] [4j56] [4j56_H] [4j56_D] [4j56_A] [4j56_E] [4j56_G] [4j56_C] [4j56_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4J56
  • Community annotation for 4J56 at PDBWiki (http://pdbwiki.org)

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