4JDA Complex structure of abscisic acid receptor PYL3 with (-)-ABA date 2013-02-24
authors Zhang, X., Wang, G., Chen, Z.
compound source
symmetry
R_factor
R_Free 0.26728
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.65
ligand A9S enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B
  • protein phosphatase inhibito...


  • Primary referenceStructural Insights into the Abscisic Acid Stereospecificity by the ABA Receptors PYR/PYL/RCAR., Zhang X, Jiang L, Wang G, Yu L, Zhang Q, Xin Q, Wu W, Gong Z, Chen Z, PLoS One. 2013 Jul 2;8(7):e67477. doi: 10.1371/journal.pone.0067477. Print 2013. PMID:23844015
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (231 Kb) [Save to disk]
  • Biological Unit Coordinates (4jda.pdb1.gz) 112 Kb
  • Biological Unit Coordinates (4jda.pdb2.gz) 112 Kb
  • LPC: Ligand-Protein Contacts for 4JDA
  • CSU: Contacts of Structural Units for 4JDA
  • Structure Factors (484 Kb)
  • Retrieve 4JDA in mmCIF format [Save to disk]
  • Re-refined 4jda structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4JDA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4JDA
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4JDA, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4jda_B] [4jda_C] [4jda] [4jda_A] [4jda_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4JDA
  • Community annotation for 4JDA at PDBWiki (http://pdbwiki.org)

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