4JDY		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	GOL	enzyme
Gene Ontology	Chain Function Process Component B, A, C
Primary reference	Crystal structure of Mycobacterium tuberculosis Rv2606c: A pyridoxal biosynthesis lyase., Kim S, Kim KJ, Biochem Biophys Res Commun. 2013 May 31;435(2):255-9. doi:, 10.1016/j.bbrc.2013.04.068. Epub 2013 Apr 30. PMID:23643787

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (129 Kb) [Save to disk] Biological Unit Coordinates (4jdy.pdb1.gz) 491 Kb LPC: Ligand-Protein Contacts for 4JDY CSU: Contacts of Structural Units for 4JDY Structure Factors (1590 Kb) Retrieve 4JDY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4JDY from S2C, [Save to disk] Re-refined 4jdy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4JDY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4jdy] [4jdy_A] [4jdy_B] [4jdy_C] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---