4JGI date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand COB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure of the cobalamin-binding protein of a putative O-demethylase from Desulfitobacterium hafniense DCB-2., Sjuts H, Dunstan MS, Fisher K, Leys D, Acta Crystallogr D Biol Crystallogr. 2013 Aug;69(Pt 8):1609-16. doi:, 10.1107/S0907444913011323. Epub 2013 Jul 20. PMID:23897483
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (153 Kb) [Save to disk]
  • Biological Unit Coordinates (4jgi.pdb1.gz) 75 Kb
  • Biological Unit Coordinates (4jgi.pdb2.gz) 74 Kb
  • Biological Unit Coordinates (4jgi.pdb3.gz) 148 Kb
  • LPC: Ligand-Protein Contacts for 4JGI
  • CSU: Contacts of Structural Units for 4JGI
  • Structure Factors (1067 Kb)
  • Retrieve 4JGI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4JGI from S2C, [Save to disk]
  • Re-refined 4jgi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4JGI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4jgi] [4jgi_A] [4jgi_B]
  • SWISS-PROT database:
  • Domain found in 4JGI: [B12-binding_2 ] by SMART

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science