4KDP		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	EDO, TRS	enzyme
Gene	SE
Gene Ontology	Chain Function Process Component C, D, E, B, F, A, G
Primary reference	TcaR-ssDNA complex crystal structure reveals new DNA binding mechanism of the MarR family proteins., Chang YM, Ho CH, Chen CK, Maestre-Reyna M, Chang-Chien MW, Wang AH, Nucleic Acids Res. 2014 Feb 14. PMID:24531929

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (187 Kb) [Save to disk] Biological Unit Coordinates (4kdp.pdb1.gz) 56 Kb Biological Unit Coordinates (4kdp.pdb2.gz) 55 Kb Biological Unit Coordinates (4kdp.pdb3.gz) 51 Kb Biological Unit Coordinates (4kdp.pdb4.gz) 51 Kb LPC: Ligand-Protein Contacts for 4KDP CSU: Contacts of Structural Units for 4KDP Structure Factors (213 Kb) Retrieve 4KDP in mmCIF format [Save to disk] Re-refined 4kdp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4KDP in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4kdp] [4kdp_A] [4kdp_B] [4kdp_C] [4kdp_D] [4kdp_E] [4kdp_F] [4kdp_G] [4kdp_H] [4kdp_J] SWISS-PROT database: Domain found in 4KDP: [HTH_MARR ] by SMART

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