OCA Atlas for 4KVM

4KVM

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

1XE, CL, SO4

enzyme

Gene
Ontology

Chain	Function	Process	Component
D, B, C, A	acetyltransferase activator ...		NatA complex
F, H, E, G

Primary reference

Molecular basis for N-terminal acetylation by the heterodimeric NatA complex., Liszczak G, Goldberg JM, Foyn H, Petersson EJ, Arnesen T, Marmorstein R, Nat Struct Mol Biol. 2013 Aug 4. doi: 10.1038/nsmb.2636. PMID:23912279

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1210 Kb) [Save to disk]

Biological Unit Coordinates (4kvm.pdb1.gz) 305 Kb

Biological Unit Coordinates (4kvm.pdb2.gz) 306 Kb

Biological Unit Coordinates (4kvm.pdb3.gz) 306 Kb

Biological Unit Coordinates (4kvm.pdb4.gz) 305 Kb

LPC: Ligand-Protein Contacts for 4KVM

CSU: Contacts of Structural Units for 4KVM

Structure Factors (999 Kb)

Retrieve 4KVM in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4KVM from S2C, [Save to disk]

Re-refined 4kvm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4KVM in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4kvm] [4kvm_A] [4kvm_B] [4kvm_C] [4kvm_D] [4kvm_E] [4kvm_F] [4kvm_G] [4kvm_H] [4kvm_I] [4kvm_J] [4kvm_K] [4kvm_L]

SWISS-PROT database:

Domain found in 4KVM: [TPR ] by SMART

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