4M6D
Crystal structure of the aptamer minF-lysozyme complex.
date
authors
Malashkevich, V.N., Padlan, F.C., Toro, R., Girvin, M., Almo, S.C., NYSGRC, New.York.Structural.Genomics.Research.Consortium.
compound
source
symmetry
R_factor
R_Free
0.21600
crystal
cell
length a
length b
length c
angle alpha
angle beta
angle gamma
method
X-Ray Diffraction
resolution
2.68
Gene
Ontology
Chain
Function
Process
Component
A, C, K, I, G, E
Data retrieval
Asymmetric unit, PDB entry:
[header only]
[complete with coordinates]
(495 Kb)
[Save to disk]
Biological Unit Coordinates
(4m6d.pdb1.gz) 83 Kb
Biological Unit Coordinates
(4m6d.pdb2.gz) 83 Kb
Biological Unit Coordinates
(4m6d.pdb3.gz) 83 Kb
Biological Unit Coordinates
(4m6d.pdb4.gz) 83 Kb
Biological Unit Coordinates
(4m6d.pdb5.gz) 82 Kb
Biological Unit Coordinates
(4m6d.pdb6.gz) 84 Kb
CSU:
Contacts of Structural Units
for 4M6D
Structure Factors
(509 Kb)
Retrieve 4M6D in
mmCIF
format
[Save to disk]
SEQRES to COORDINATES
correlation for
4M6D
from
S2C
,
[Save to disk]
Re-refined
4m6d
structure from
PDB_REDO
, a databank with updated and optimised macromolecular X-ray diffraction structure models
View 4M6D in 3D
Proteopedia
, because life has more than 2D.
On
Jmol
, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
On
FirstGlance
, an excellent tool for a guided tour on the structure components, by
E. Martz
.
Visual 3D analysis of 4M6D
Ramachandran
plot from
PDBSum
Structure-derived information
Dipole
moment, from
Dipole Server
at Weizmann Institute
3D motif for
4M6D
, from
MSDmotif
at EBI
Sequence-derived information
View one-letter amino acid or nucleotide sequence for each chain:
[4m6d_A]
[4m6d_H]
[4m6d_I]
[4m6d_J]
[4m6d_C]
[4m6d_D]
[4m6d]
[4m6d_F]
[4m6d_E]
[4m6d_L]
[4m6d_B]
[4m6d_K]
[4m6d_G]
SWISS-PROT
database:
Domain
organization of by
SWISSPFAM
Domain
found in 4M6D:
[LYZ1 ]
by
SMART
Other resources with information on 4M6D
Community annotation for
4M6D
at
PDBWiki
(http://pdbwiki.org)
You may enter another PDB ID code
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