4MIF date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand FDA, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, D, B


Primary referenceCrystal structures of pyranose 2-oxidase suggest that the N-terminus acts as a propeptide that assists in homotetramer assembly., Hassan N, Tan TC, Spadiut O, Pisanelli I, Fusco L, Haltrich D, Peterbauer CK, Divne C, FEBS Open Bio. 2013 Nov 5;3:496-504. PMID:24282677
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (769 Kb) [Save to disk]
  • Biological Unit Coordinates (4mif.pdb1.gz) 757 Kb
  • LPC: Ligand-Protein Contacts for 4MIF
  • CSU: Contacts of Structural Units for 4MIF
  • Structure Factors (6166 Kb)
  • Retrieve 4MIF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4MIF from S2C, [Save to disk]
  • Re-refined 4mif structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4MIF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4MIF
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4MIF, from MSDmotif at EBI
  • Fold representative 4mif from FSSP and Dali (Families of Structurally Similar Proteins)
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4mif] [4mif_A] [4mif_B] [4mif_C] [4mif_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4MIF
  • Community annotation for 4MIF at PDBWiki (http://pdbwiki.org)

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