4NYB		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	2QC, A23, MG, MN	enzyme
Primary reference	Validating Fragment-Based Drug Discovery for Biological RNAs: Lead Fragments Bind and Remodel the TPP Riboswitch Specifically., Warner KD, Homan P, Weeks KM, Smith AG, Abell C, Ferre-D'Amare AR, Chem Biol. 2014 May 22;21(5):591-5. doi: 10.1016/j.chembiol.2014.03.007. Epub, 2014 Apr 24. PMID:24768306

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk] Biological Unit Coordinates (4nyb.pdb1.gz) 34 Kb LPC: Ligand-Protein Contacts for 4NYB CSU: Contacts of Structural Units for 4NYB Structure Factors (52 Kb) Retrieve 4NYB in mmCIF format [Save to disk] Re-refined 4nyb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4NYB in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4nyb] [4nyb_A] SWISS-PROT database:

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