4OGQ Internal Lipid Architecture of the Hetero-Oligomeric Cytochrome b6f Complex date
authors Hasan, S.S., Cramer, W.A.
compound source
symmetry
R_factor
R_Free 0.2324
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.50
ligand 1O2, 2WA, 2WD, 2WM, 3WM, 7PH, 8K6, BCR, CD, CLA, FES, HEC, MYS, OCT, OPC, SQD, UMQ enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


C


D
  • electron transporter, transf...


  • E
  • electron transfer activity
  • electron transporter, transf...


  • F
  • electron transfer activity


  • G
  • electron transporter, transf...


  • H
  • electron transfer activity
  • electron transporter, transf...


  • Primary referenceInternal Lipid Architecture of the Hetero-Oligomeric Cytochrome b6f Complex., Hasan SS, Cramer WA, Structure. 2014 Jul 8;22(7):1008-15. doi: 10.1016/j.str.2014.05.004. Epub 2014, Jun 12. PMID:24931468
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (359 Kb) [Save to disk]
  • Biological Unit Coordinates (4ogq.pdb1.gz) 659 Kb
  • LPC: Ligand-Protein Contacts for 4OGQ
  • CSU: Contacts of Structural Units for 4OGQ
  • Structure Factors (1374 Kb)
  • Retrieve 4OGQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4OGQ from S2C, [Save to disk]
  • Re-refined 4ogq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4OGQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4OGQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4OGQ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ogq_A] [4ogq_G] [4ogq_F] [4ogq_B] [4ogq_D] [4ogq_C] [4ogq_E] [4ogq] [4ogq_H]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4OGQ
  • Community annotation for 4OGQ at PDBWiki (http://pdbwiki.org)

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