4OO1 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MES, MG, MPD, PO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A

  • nuclear exosome (RNase compl...
  • cytoplasmic exosome (RNase c...
  • B

  • nuclear exosome (RNase compl...
  • cytoplasmic exosome (RNase c...
  • C

  • nuclear exosome (RNase compl...
  • cytoplasmic exosome (RNase c...
  • D

  • nuclear exosome (RNase compl...
  • cytoplasmic exosome (RNase c...
  • E

  • nuclear exosome (RNase compl...
  • cytoplasmic exosome (RNase c...
  • F

  • nuclear exosome (RNase compl...
  • cytoplasmic exosome (RNase c...
  • G

  • nuclear exosome (RNase compl...
  • cytoplasmic exosome (RNase c...
  • H

  • nuclear exosome (RNase compl...
  • cytoplasmic exosome (RNase c...
  • I

  • nuclear exosome (RNase compl...
  • cytoplasmic exosome (RNase c...
  • J


    Primary referenceStructure of an Rrp6-RNA exosome complex bound to poly(A) RNA., Wasmuth EV, Januszyk K, Lima CD, Nature. 2014 Jul 24;511(7510):435-9. doi: 10.1038/nature13406. Epub 2014 Jul 6. PMID:25043052
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (933 Kb) [Save to disk]
  • Biological Unit Coordinates (4oo1.pdb1.gz) 919 Kb
  • LPC: Ligand-Protein Contacts for 4OO1
  • CSU: Contacts of Structural Units for 4OO1
  • Structure Factors (884 Kb)
  • Retrieve 4OO1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4OO1 from S2C, [Save to disk]
  • Re-refined 4oo1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4OO1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4oo1] [4oo1_A] [4oo1_B] [4oo1_C] [4oo1_D] [4oo1_E] [4oo1_F] [4oo1_G] [4oo1_H] [4oo1_I] [4oo1_J] [4oo1_S]
  • SWISS-PROT database:
  • Domains found in 4OO1: [35EXOc] [HRDC] [S1 ] by SMART

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