4PJO date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL, EOH, EPE, GTP, K, MG, SO4, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, a, O, o

  • catalytic step 2 spliceosome...
    • C, q, Q, c


    E, S, e, s

  • catalytic step 2 spliceosome...
    • M, l, L, m


    d, r, R, D

  • catalytic step 2 spliceosome...
    • t, f, T, F


    u, G, g, U

  • catalytic step 2 spliceosome...
    • Primary referenceCrystal structure of human U1 snRNP, a small nuclear ribonucleoprotein particle, reveals the mechanism of 5' splice site recognition., Kondo Y, Oubridge C, van Roon AM, Nagai K, Elife. 2015 Jan 2;4. doi: 10.7554/eLife.04986. PMID:25555158
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (552 Kb) [Save to disk]
  • Biological Unit Coordinates (4pjo.pdb1.gz) 143 Kb
  • Biological Unit Coordinates (4pjo.pdb2.gz) 140 Kb
  • Biological Unit Coordinates (4pjo.pdb3.gz) 140 Kb
  • Biological Unit Coordinates (4pjo.pdb4.gz) 142 Kb
  • LPC: Ligand-Protein Contacts for 4PJO
  • CSU: Contacts of Structural Units for 4PJO
  • Structure Factors (4221 Kb)
  • Retrieve 4PJO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4PJO from S2C, [Save to disk]
  • Re-refined 4pjo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4PJO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4pjo_2] [4pjo] [4pjo_1] [4pjo_3] [4pjo_4] [4pjo_A] [4pjo_B] [4pjo_C] [4pjo_D] [4pjo_E] [4pjo_F] [4pjo_G] [4pjo_K] [4pjo_L] [4pjo_M] [4pjo_N] [4pjo_O] [4pjo_P] [4pjo_Q] [4pjo_R] [4pjo_S] [4pjo_T] [4pjo_U] [4pjo_X] [4pjo_Y] [4pjo_a] [4pjo_b] [4pjo_c] [4pjo_d] [4pjo_e] [4pjo_f] [4pjo_g] [4pjo_k] [4pjo_l] [4pjo_m] [4pjo_n] [4pjo_o] [4pjo_p] [4pjo_q] [4pjo_r] [4pjo_s] [4pjo_t] [4pjo_u] [4pjo_x] [4pjo_y]
  • SWISS-PROT database:
  • Domains found in 4PJO: [Sm] [ZnF_U1 ] by SMART

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