OCA Atlas for 4Q0C

4Q0C

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
B, D, A, C

Primary reference

Virulence Regulation with Venus Flytrap Domains: Structure and Function of the Periplasmic Moiety of the Sensor-Kinase BvgS., Dupre E, Herrou J, Lensink MF, Wintjens R, Vagin A, Lebedev A, Crosson S, Villeret V, Locht C, Antoine R, Jacob-Dubuisson F, PLoS Pathog. 2015 Mar 4;11(3):e1004700. doi: 10.1371/journal.ppat.1004700., eCollection 2015 Mar. PMID:25738876

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (317 Kb) [Save to disk]

Biological Unit Coordinates (4q0c.pdb1.gz) 157 Kb

Biological Unit Coordinates (4q0c.pdb2.gz) 159 Kb

CSU: Contacts of Structural Units for 4Q0C

Structure Factors (437 Kb)

Retrieve 4Q0C in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4Q0C from S2C, [Save to disk]

Re-refined 4q0c structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4Q0C in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4q0c] [4q0c_A] [4q0c_B] [4q0c_C] [4q0c_D]

SWISS-PROT database:

Domain found in 4Q0C: [PBPb ] by SMART

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