4QF7 Crystal Structure of the Complex of Phospholipase A2 with Corticosterone at 1.48 A Resolution date
authors Shukla, P.K., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.
compound source
symmetry
R_factor
R_Free 0.25546
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.48
ligand C0R enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • toxin activity


    • Primary referenceStructures and binding studies of the complexes of phospholipase A2 with five inhibitors., Shukla PK, Gautam L, Sinha M, Kaur P, Sharma S, Singh TP, Biochim Biophys Acta. 2014 Dec 23;1854(4):269-277. doi:, 10.1016/j.bbapap.2014.12.017. PMID:25541253
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (4qf7.pdb1.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 4QF7
  • CSU: Contacts of Structural Units for 4QF7
  • Structure Factors (1052 Kb)
  • Retrieve 4QF7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4QF7 from S2C, [Save to disk]
  • Re-refined 4qf7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4QF7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4QF7
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4QF7, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4qf7] [4qf7_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4QF7: [PA2c ] by SMART
    • Other resources with information on 4QF7
  • Community annotation for 4QF7 at PDBWiki (http://pdbwiki.org)

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