4RAG CRYSTAL STRUCTURE of PPC2A-D38K date
authors Pan, C., Tang, J.Y., Xu, Y.F., Xiao, P., Liu, H.D., Wang, H.A., Wang, W.B., Meng, F.G., Yu, X., Sun, J.P.
compound source
symmetry
R_factor
R_Free 0.2297
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.85
ligand MN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe catalytic role of the M2 metal ion in PP2Calpha., Pan C, Tang JY, Xu YF, Xiao P, Liu HD, Wang HA, Wang WB, Meng FG, Yu X, Sun JP, Sci Rep. 2015 Feb 24;5:8560. doi: 10.1038/srep08560. PMID:25708299
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (66 Kb) [Save to disk]
  • Biological Unit Coordinates (4rag.pdb1.gz) 61 Kb
  • LPC: Ligand-Protein Contacts for 4RAG
  • CSU: Contacts of Structural Units for 4RAG
  • Structure Factors (881 Kb)
  • Retrieve 4RAG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4RAG from S2C, [Save to disk]
  • Re-refined 4rag structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4RAG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4RAG
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4rag] [4rag_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4RAG: [PP2C_SIG] [PP2Cc ] by SMART
    • Other resources with information on 4RAG
  • Community annotation for 4RAG at PDBWiki (http://pdbwiki.org)

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