4TR7 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • DNA-directed DNA polymerase ...
  • 3'-5' exonuclease activity


    • Primary referenceDifferential Modes of Peptide Binding onto Replicative Sliding Clamps from Various Bacterial Origins., Wolff P, Amal I, Olieric V, Chaloin O, Gygli G, Ennifar E, Lorber B, Guichard G, Wagner JE, Dejaegere A, Burnouf DY, J Med Chem. 2014 Aug 29. PMID:25170813
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (429 Kb) [Save to disk]
  • Biological Unit Coordinates (4tr7.pdb1.gz) 424 Kb
  • CSU: Contacts of Structural Units for 4TR7
  • Structure Factors (370 Kb)
  • Retrieve 4TR7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4TR7 from S2C, [Save to disk]
  • Re-refined 4tr7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4TR7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4TR7
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4TR7, from MSDmotif at EBI
  • Fold representative 4tr7 from FSSP and Dali (Families of Structurally Similar Proteins)
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4tr7] [4tr7_A] [4tr7_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4TR7: [POL3Bc ] by SMART
    • Other resources with information on 4TR7
  • Community annotation for 4TR7 at PDBWiki (http://pdbwiki.org)

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