4XVC Crystal structure of an esterase from the bacterial hormone-sensitive lipase (HSL) family date
authors Zhang, Y., Li, P.
compound source
symmetry
R_factor
R_Free 0.232
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.00
ligand PMS enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Primary referenceInter-Domain Hydrophobic Interactions Modulate the Thermostability of Microbial Esterases from the Hormone-Sensitive Lipase Family., Li PY, Chen XL, Ji P, Li CY, Wang P, Zhang Y, Xie BB, Qin QL, Su HN, Zhou BC, Zhang YZ, Zhang XY, J Biol Chem. 2015 Mar 14. pii: jbc.M115.646182. PMID:25771540
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (403 Kb) [Save to disk]
  • Biological Unit Coordinates (4xvc.pdb1.gz) 54 Kb
  • Biological Unit Coordinates (4xvc.pdb2.gz) 54 Kb
  • Biological Unit Coordinates (4xvc.pdb3.gz) 54 Kb
  • Biological Unit Coordinates (4xvc.pdb4.gz) 54 Kb
  • Biological Unit Coordinates (4xvc.pdb5.gz) 53 Kb
  • Biological Unit Coordinates (4xvc.pdb6.gz) 54 Kb
  • Biological Unit Coordinates (4xvc.pdb7.gz) 54 Kb
  • Biological Unit Coordinates (4xvc.pdb8.gz) 54 Kb
  • LPC: Ligand-Protein Contacts for 4XVC
  • CSU: Contacts of Structural Units for 4XVC
  • Structure Factors (2783 Kb)
  • Retrieve 4XVC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4XVC from S2C, [Save to disk]
  • Re-refined 4xvc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4XVC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4XVC
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4XVC, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4xvc_G] [4xvc_D] [4xvc_H] [4xvc_A] [4xvc_F] [4xvc_B] [4xvc_E] [4xvc] [4xvc_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4XVC
  • Community annotation for 4XVC at PDBWiki (http://pdbwiki.org)

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