4Y49 Crystal structure of yeast N-terminal acetyltransferase (ppGpp) NatE in complex with a bisubstrate date
authors Dong, J., Wang, S., York, J.D.
compound source
R_Free 0.42087
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.95
ligand ACO, CMC, G4P enzyme
A, M, G

N, B, H

O, C, I

  • NatA complex
  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (784 Kb) [Save to disk]
  • Biological Unit Coordinates (4y49.pdb1.gz) 259 Kb
  • Biological Unit Coordinates (4y49.pdb2.gz) 256 Kb
  • Biological Unit Coordinates (4y49.pdb3.gz) 257 Kb
  • LPC: Ligand-Protein Contacts for 4Y49
  • CSU: Contacts of Structural Units for 4Y49
  • Structure Factors (571 Kb)
  • Retrieve 4Y49 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4Y49 from S2C, [Save to disk]
  • Re-refined 4y49 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4Y49 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4Y49
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 4y49 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4y49] [4y49_B] [4y49_Q] [4y49_M] [4y49_H] [4y49_N] [4y49_E] [4y49_K] [4y49_A] [4y49_O] [4y49_I] [4y49_C] [4y49_G]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4Y49
  • Community annotation for 4Y49 at PDBWiki (http://pdbwiki.org)

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