4YAQ date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand FUC, MES, NAG, PCA, PO4, TYS enzyme
Primary referenceRedesigned HIV antibodies exhibit enhanced neutralizing potency and breadth., Willis JR, Sapparapu G, Murrell S, Julien JP, Singh V, King HG, Xia Y, Pickens JA, LaBranche CC, Slaughter JC, Montefiori DC, Wilson IA, Meiler J, Crowe JE Jr, J Clin Invest. 2015 Jun 1;125(6):2523-31. doi: 10.1172/JCI80693. Epub 2015 May, 18. PMID:25985274
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (151 Kb) [Save to disk]
  • Biological Unit Coordinates (4yaq.pdb1.gz) 75 Kb
  • Biological Unit Coordinates (4yaq.pdb2.gz) 74 Kb
  • LPC: Ligand-Protein Contacts for 4YAQ
  • CSU: Contacts of Structural Units for 4YAQ
  • Structure Factors (433 Kb)
  • Retrieve 4YAQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4YAQ from S2C, [Save to disk]
  • Re-refined 4yaq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4YAQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4yaq] [4yaq_A] [4yaq_B] [4yaq_H] [4yaq_L]
  • SWISS-PROT database:
  • Domains found in 4YAQ: [IG_like] [IGv ] by SMART

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