4YES date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 45S, GOL, MG, NAG, TYS enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceImproved Stability of Proline-Derived Direct Thrombin Inhibitors through Hydroxyl to Heterocycle Replacement., Chobanian HR, Pio B, Guo Y, Shen H, Huffman MA, Madeira M, Salituro G, Terebetski JL, Ormes J, Jochnowitz N, Hoos L, Zhou Y, Lewis D, Hawes B, Mitnaul L, O'Neill K, Ellsworth K, Wang L, Biftu T, Duffy JL, ACS Med Chem Lett. 2015 Mar 13;6(5):553-7. doi: 10.1021/acsmedchemlett.5b00047., eCollection 2015 May 14. PMID:26005532
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk]
  • Biological Unit Coordinates (4yes.pdb1.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 4YES
  • CSU: Contacts of Structural Units for 4YES
  • Structure Factors (1313 Kb)
  • Retrieve 4YES in mmCIF format [Save to disk]
  • Re-refined 4yes structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4YES in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4yes] [4yes_A] [4yes_B] [4yes_H]
  • SWISS-PROT database:
  • Domain found in 4YES: [Tryp_SPc ] by SMART

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