4YGI		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	5HC, MG	enzyme
Primary reference	Mechanistic insights into the recognition of 5-methylcytosine oxidation derivatives by the SUVH5 SRA domain., Rajakumara E, Nakarakanti NK, Nivya MA, Satish M, Sci Rep. 2016 Feb 4;6:20161. doi: 10.1038/srep20161. PMID:26841909

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (33 Kb) [Save to disk] Biological Unit Coordinates (4ygi.pdb1.gz) 54 Kb LPC: Ligand-Protein Contacts for 4YGI CSU: Contacts of Structural Units for 4YGI Structure Factors (70 Kb) Retrieve 4YGI in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4YGI from S2C, [Save to disk] Re-refined 4ygi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4YGI in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4ygi] [4ygi_A] [4ygi_B] SWISS-PROT database: Domain found in 4YGI: [SRA ] by SMART

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